HUMAN CHROMOSOME 21 MURINE HOMOLOGUES EXPRESSION
PATTERNS BY RT-PCR |
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tissues2: |
1 |
2 |
3 |
4 |
5 |
6 |
7 |
8 |
9 |
10 |
11 |
12 |
13 |
14 |
15 |
16 |
|
number |
gene name and aliases |
status1 |
forward primer: |
reverse primer: |
brain |
heart |
kidney |
thymus |
liver |
stomach |
muscle |
lung |
testis |
ovary |
skin |
eyes |
E8.5 |
E9.5 |
E12.5 |
E19 |
gene |
control |
b-actin |
|
AGCCATGTACGTAGCCATCC |
TTTGATGTCACGCACGATTT |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
b-actin |
126 |
NDUFV3 |
|
CCGGGAGAACTGGTTTCTGT |
TTGGAGAGGTCCAGGTTCAG |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
NDUFV3 |
127 |
PKNOX |
|
GCAGATTCAGAGTGCCATCA |
CCATCCTCTTGATGCAAGGT |
+ |
|
+ |
|
|
|
|
|
+ |
|
|
+/- |
|
|
|
|
PKNOX |
128 |
CBS |
|
CTGCGTGTTCAAGAGCTGAG |
CAGGTGGATCGGTTTGAACT |
+ |
|
+ |
|
+ |
+ |
|
+ |
|
|
|
+ |
|
+ |
|
|
CBS |
129 |
U2AF1 |
|
CCATTGCCCTCTTGAACATT |
ATCACGGCTTTCTCTGCATC |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
U2AF1 |
130 |
CRYAA |
|
CCGGGACAAGTTTGTCATCT |
ATCCAAACCGGACTGGACTT |
|
|
+ |
+ |
+ |
+ |
+ |
+ |
|
|
+ |
+ |
+ |
+ |
+ |
+ |
CRYAA |
131 |
HSF2BP |
|
TGAATGAGGCAAAACAGCAG |
ATTCCAGCCAGTGCAAAGAC |
+ |
|
+ |
+ |
|
|
|
+ |
+ |
+ |
|
+ |
|
+ |
+ |
|
HSF2BP |
132 |
SNF1LK |
|
CTTCGACATGCAAGGCTACA |
GGAACCTCCAGACTGCTGAG |
+ |
+ |
+ |
+ |
+/- |
+ |
|
+ |
+ |
+ |
|
+/- |
|
|
|
|
SNF1LK |
133 |
H2BFS |
|
ACAAGGTGCTGAAGCAAGTG |
TGGAGCTGGTGTACTTGGTG |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
H2BFS |
134 |
KIAA0179 |
|
AGAAGTCAGGACCCCAACAA |
GTTTTCAGCGGCTTCTTCAG |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
|
KIAA0179 |
135 |
PDXK |
|
CATGTTCCCTCTGCAGGTTT |
GGCGAGAGTTCTGTTGCTTC |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
|
+ |
+ |
+ |
+ |
|
|
PDXK |
136 |
CSTB |
|
AAGTCCCAGCTTGAATCGAA |
GAGAGCTCATCGTGCCTTTC |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
CSTB |
137 |
NNP1 |
|
CAGTTCATCGACCCCTTCTG |
AGCTTCTTGGGTGGTGTGTC |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
NNP1 |
138 |
AGPAT3 |
|
CTGTACTGCGAAGGAACACG |
TCACACACATGTCTGCCTCA |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
AGPAT3 |
139 |
TMEM1 |
|
GCATGGTCACCACAGATCAC |
GCTGGGACTGTGTGTTCAGA |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
|
+ |
|
|
TMEM1 |
140 |
PWP2H |
|
GGGACCCTGAGAATGCTGTA |
GAGACAGGTTGCAGGAGAGC |
+ |
|
+ |
+/- |
+ |
|
|
|
+ |
+/- |
+/- |
+ |
|
+ |
|
|
PWP2H |
141 |
C21orf33 |
|
CAGATCTTTGCTCCCGATGT |
ACCCGCTCTACCTCCTTGTT |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
|
C21orf33 |
142 |
KIAA0653 |
|
TCTTGGAAGAGGTGGTCAGG |
TCCAAGGGAGCCTTAATGTG |
+ |
+/- |
+ |
+ |
|
+ |
|
+ |
|
+ |
|
+ |
|
|
|
|
KIAA0653 |
143 |
DNMT3L |
|
CCTCTGCTGTGGAACTCTCC |
CCATGGCATTGATCCTCTCT |
|
|
|
+ |
|
|
|
|
|
|
|
+ |
|
+ |
|
|
DNMT3L |
144 |
AIRE |
|
CTTCAGCACTGTGCCCTCTA |
CCAGAGGTGGGTACAGCTTC |
|
|
+ |
+ |
+ |
|
|
|
|
|
|
|
|
|
|
|
AIRE |
145 |
PFKL |
|
AGGGTCAGGTGCAAGAAGTG |
GCTGGGATGACACACATGAC |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
PFKL |
146 |
C21orf2 |
|
ACAGTGTCTCCACCCTGGAA |
GTCAGCTCTTCCTCGGTCAC |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+/- |
+ |
+ |
+ |
C21orf2 |
147 |
TRPM2 |
|
GACAATGCCTGGATCGAGAC |
GAGGATGGTCTTGTGGTTCGCATA |
+ |
|
+ |
+ |
+ |
+ |
|
+ |
|
|
+ |
+ |
|
|
|
|
TRPM2 |
148 |
LRRC3 |
|
GGCAAGTTGAGTGCCAAGAT |
ATGGTAAACCAGCCGAACAT |
+ |
+ |
+ |
+ |
+ |
+ |
|
|
+ |
|
+ |
+ |
|
+ |
|
|
LRRC3 |
149 |
HSM801110 |
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HSM801110 |
150 |
C21orf29 |
|
GAACATCACCGCTCAGACCT |
GAGGTAAGAGCCAGCAGTGG |
+ |
|
+ |
|
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+ |
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+ |
|
+ |
+ |
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+ |
+ |
|
C21orf29 |
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Legend: |
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1orthologous gene status in
mouse: |
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done Expression Atlas |
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done RT-PCR panel only |
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no murine probes |
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no murine orthologue |
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2the (+) sign
specifies the identification of the transcript in this tissue by RT-PCR, the
(+/-) sign specifies an extremely low expression of this transcript in this
tissue |
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