HUMAN CHROMOSOME 21 MURINE HOMOLOGUES EXPRESSION
PATTERNS BY RT-PCR |
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tissues2: |
1 |
2 |
3 |
4 |
5 |
6 |
7 |
8 |
9 |
10 |
11 |
12 |
13 |
14 |
15 |
16 |
|
number |
gene name and aliases |
status1 |
forward primer: |
reverse primer: |
brain |
heart |
kidney |
thymus |
liver |
stomach |
muscle |
lung |
testis |
ovary |
skin |
eyes |
E8.5 |
E9.5 |
E12.5 |
E19 |
gene |
control |
b-actin |
|
AGCCATGTACGTAGCCATCC |
TTTGATGTCACGCACGATTT |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
b-actin |
101 |
IGSF5 |
|
AGAGATGTCCTGGCTGTGCT |
CGAGATGAAGCTGTCAGTGC |
+ |
|
+ |
|
+ |
+ |
|
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
|
IGSF5 |
102 |
PCP4 |
|
CGGAAAAGACAAGACGTCAG |
TCCTGCCTTTTTCTTCTGGA |
+ |
+/- |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
PCP4 |
103 |
DSCAM |
|
CCTCATACACCTGCCTCCAT |
CACCCTCTCGCTGAGGTAAG |
+ |
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+ |
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+ |
|
+ |
+ |
+/- |
|
DSCAM |
104 |
BACE2 |
|
ACAACCTTCAGGGGGACTCT |
TGACAAGGTCCTCACCAACA |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+/- |
BACE2 |
105 |
C21orf11 |
|
GTGATAACTCCGGGCCAAT |
TTGGGTATGCATCCTTCGAT |
|
|
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|
+ |
|
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+ |
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+ |
C21orf11 |
106 |
MX2 |
|
CTGTCATTGGGGACCAGAGT |
AGACCTACCCCAGCAATGAA |
|
|
+ |
+ |
+ |
|
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+ |
|
+/- |
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|
MX2 |
107 |
MX1 |
|
TGGAAGCACTGTCTGGAGTG |
ACATTTGGGGAGCTGACATC |
+ |
|
+ |
|
+ |
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+ |
|
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+ |
|
+ |
|
|
MX1 |
108 |
TMPRSS2 |
|
GCAAGCCTCAACATCTGTCA |
GTTGGGACAATGTGCTACCC |
+ |
|
+ |
|
+ |
+ |
|
+ |
|
|
+ |
+ |
|
|
+ |
|
TMPRSS2 |
109 |
C21orf83 |
|
AGAGTTCACAGGCAGTGTGG |
GCCACTGACAGTATCAAAGG |
+ |
+ |
+ |
+ |
+ |
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+ |
+ |
+ |
+ |
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+ |
|
C21orf83 |
110 |
ANKRD3/DIK/PKK |
|
CCAGGCGAGAAAAGCTCTC |
GGAAAAGGCTGAGTCCACTG |
+ |
|
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
|
+ |
|
+ |
ANKRD3/DIK/PKK |
111 |
ZNF298 |
|
TTCGAAACTGTTCAGCCGTAAGG |
TCTTACTGCAGACCTCACAGG |
+ |
|
+ |
+ |
|
+ |
|
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+ |
+ |
+ |
+ |
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|
ZNF298 |
112 |
C21orf25 |
|
CTGACCTCAGTTGGGAGGAG |
ATTTCAGCTCCCCAGGTTCT |
+ |
+/- |
+ |
|
+ |
+ |
|
+ |
|
+ |
+ |
+ |
|
+ |
+/- |
|
C21orf25 |
113 |
ZNF295 |
|
TCTCAAAAGCGAAGTGTCATTGT |
AGGTCTCTGAAACGTATATG |
|
|
|
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|
ZNF295 |
114 |
|
GAGCTGAAGCAAGAACACGA |
CTTTTGTGGTGACGATGTGG |
+ |
|
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|
115 |
UMODL1 |
|
ACTATAGCGTGTCCGCCAGC |
TTGCAGTGCAGGTAGACGATGG |
+ |
|
+ |
+ |
+ |
+ |
|
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+ |
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+ |
|
|
UMODL1 |
116 |
ABCG1/WHITE |
|
TCAACAGTGGAGAGCTGGTG |
TCATCCTTCTCCTGCAGCTT |
+ |
|
+ |
+ |
+/- |
+/- |
|
+/- |
|
+ |
+ |
+ |
|
|
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|
ABCG1/WHITE |
117 |
TFF3 |
|
TCTGGCTAATGCTGTTGGTG |
CAGGGCACATTTGGGATACT |
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+ |
+ |
+ |
+ |
|
|
|
|
|
|
+ |
+ |
+ |
+ |
TFF3 |
118 |
TFF2 |
|
TGACACCCCACAACAGAAAG |
CACCAGGGCACTTCAAAGAT |
|
|
+ |
+ |
+ |
+ |
|
+ |
+ |
|
+ |
+/- |
+ |
|
+ |
+ |
TFF2 |
119 |
TFF1 |
|
TGGAGCACAAGGTGATCTGT |
TCTTCTTGAGTGTTCTCGATGG |
|
|
|
|
|
+ |
|
|
|
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+ |
|
+ |
+ |
+ |
+ |
TFF1 |
120 |
TMPRSS3 |
|
ATTGGGTGGAGATCTGAGATCTG |
CCTGGAGTCTATACGCGAATCAC |
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TMPRSS3 |
121 |
UBASH3A |
|
GCGGCCACAGGGAGGAAGAC |
CATGGCGAATTCCCGGATG |
|
|
+ |
+ |
+ |
|
|
|
|
|
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+ |
|
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|
UBASH3A |
122 |
TSGA2 |
|
CGAGCTCATCCACCTAAACC |
TCCTCCTCCTCCTCTTCTCC |
+ |
+ |
+ |
+ |
+ |
|
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
TSGA2 |
123 |
SLC37A1 |
|
GTCCACATTGTTTGACGTGG |
CTTTCAGACTCTTGTGAGTCC |
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SLC37A1 |
124 |
PDE9A |
|
AATTCAGAGCGCACTCCCTA |
AACTCCTCCCGCATCTTTTT |
+ |
|
+ |
|
+ |
+ |
|
+ |
|
|
+ |
+ |
|
+ |
+ |
|
PDE9A |
125 |
WDR4 |
|
CTTTCTGCCTGGGACACACT |
ACGCACTCACACAGAAGCAC |
+ |
|
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
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WDR4 |
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Legend: |
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1orthologous gene status in
mouse: |
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done Expression Atlas |
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done RT-PCR panel only |
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no murine probes |
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no murine orthologue |
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2the (+) sign
specifies the identification of the transcript in this tissue by RT-PCR, the
(+/-) sign specifies an extremely low expression of this transcript in this
tissue |
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