HUMAN CHROMOSOME 21 MURINE HOMOLOGUES EXPRESSION
PATTERNS BY RT-PCR |
|
|
|
|
tissues2: |
1 |
2 |
3 |
4 |
5 |
6 |
7 |
8 |
9 |
10 |
11 |
12 |
13 |
14 |
15 |
16 |
|
number |
gene name and aliases |
status1 |
forward primer: |
reverse primer: |
brain |
heart |
kidney |
thymus |
liver |
stomach |
muscle |
lung |
testis |
ovary |
skin |
eyes |
E8.5 |
E9.5 |
E12.5 |
E19 |
gene |
control |
b-actin |
|
AGCCATGTACGTAGCCATCC |
TTTGATGTCACGCACGATTT |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
b-actin |
76 |
CBR3 |
|
GGGGACTTAACGTGCTGGT |
CGGGTAAGTGTGTCACATCG |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
|
CBR3 |
77 |
C21orf5 |
|
GGAGAGCCTCATCAATCTGG |
TCTCACCACAGCTGAGACCA |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
C21orf5 |
78 |
KIAA0136 |
|
CAAACAACATGGGTGTTGGA |
CGTCACATTGAACCCATGTC |
+ |
+/- |
+ |
+ |
+ |
|
|
|
+ |
|
+/- |
+ |
|
|
|
|
KIAA0136 |
79 |
CAF1B |
|
CTGCCCTACCGTATGGTGTT |
GTCGGGAGTCCTTATGCTCA |
+ |
|
+ |
+ |
+ |
+ |
|
+ |
+ |
+/- |
+ |
+ |
+ |
+ |
+ |
+ |
CAF1B |
80 |
CLDN14 |
|
AGGCTTCCTGCTTAGCTTCC |
ACAACAGGCAGGAGATGACC |
+ |
|
+ |
|
+ |
|
|
|
+ |
+ |
|
+/- |
|
+ |
+/- |
|
CLDN14 |
81 |
SIM2 |
|
TCAGAAGCCAGCGACCTTAT |
AGGTTTTTAGCTGGCGATGA |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
SIM2 |
82 |
HLCS |
|
GCGGAGAACATTCCAGACCTTCCCT |
CCACACAGTCAGTCAGGACAGA |
+ |
|
+ |
+/- |
+ |
+ |
|
|
+/- |
+ |
|
|
|
+ |
|
|
HLCS |
83 |
DSCR6 |
|
GCAAGCCACCATTCATTTCT |
AGAGGCTCCCTTCATTTGCT |
+ |
+ |
+ |
|
+ |
+ |
|
+ |
|
|
+ |
+ |
+ |
+ |
|
|
DSCR6 |
84 |
DSCR5 |
|
ATCTTGTGTGGGCTTTCGTT |
ATCTCTCAATGCTGGGATGG |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
DSCR5 |
85 |
TTC3 |
|
GGGTCAGCTTCAGAGGACAG |
TGTTGGCCAAAGGTGTGTAA |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
|
TTC3 |
86 |
DSCR3 |
|
TGCTGAAGCCAGGAAAGATT |
CGGAGTGATCGTGAAGTCAA |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
DSCR3 |
87 |
DYRK1A |
|
TGGGTCGCCATTAAAATCAT |
TGCGCAAACTTTCGTGTTAG |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
|
DYRK1A |
88 |
KCNJ6 GIRK2 |
|
GTGGCTTTTCTTTGGGATGA |
ATCCTACCATGAAGGCGTTG |
+ |
|
|
|
|
|
|
|
+ |
|
|
|
|
|
|
|
KCNJ6 GIRK2 |
89 |
DSCR4 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
DSCR4 |
90 |
KCNJ15 |
|
ACCAGGCCACTGTCAAATTC |
CACAAACTCAAAGCCCCAGT |
+/- |
|
+ |
+ |
|
+ |
|
+ |
+ |
|
+ |
+ |
|
+ |
|
|
KCNJ15 |
91 |
ERG |
|
CAGTAGCCGCCTTGCTAATC |
TGCACCTTGGTCATGATGTT |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
|
|
+ |
+ |
+ |
|
|
ERG |
92 |
ETS2 |
|
GGCTCTGAGCTCCAGATGTT |
CCTCAAAGCTCTCGAAGGAA |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
|
+ |
|
+ |
|
+ |
+/- |
|
ETS2 |
93 |
DSCR2 |
|
TCTGGAATGAATGGTGCAGA |
AAAGGCTGCAGGTAGACTCG |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
|
DSCR2 |
94 |
N143 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
N143 |
95 |
WDR9 |
|
AACGGATCTGTATCACTAGAGAAT |
GGCAAGCTAGTCTCACTATCTAG |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
WDR9 |
96 |
HMGN1 |
|
TGCCCAAGAGGAAGGTTAGC |
TGGACTCTGGTTTTCCGTCT |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
HMGN1 |
97 |
WRB |
|
TCGTGTTCGGGTGTAACTTG |
ATCTTGGCCAACTGAGCTGT |
+ |
+ |
+ |
|
+ |
|
|
|
+ |
|
+ |
+ |
|
|
|
|
WRB |
98 |
C21orf13 |
|
GACGGCGAGTTACTGAGGAC |
TGCCTGCAGAGTCTTTGTTG |
+ |
+ |
|
+ |
|
|
|
|
+ |
|
+ |
|
|
|
|
|
C21orf13 |
99 |
SH3BGR |
|
ACTCCAGCCAAACCAGTGAC |
AAGGCTGATCTCTGCCGTAA |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+/- |
+ |
+ |
+ |
+ |
+ |
+/- |
SH3BGR |
100 |
B3GALT5 |
|
GCAAGACGTGGGGTAGAGAG |
CAGAGTCCGTTTTCATCACG |
+ |
|
+ |
+/- |
|
+ |
|
|
|
|
|
|
|
+ |
|
|
B3GALT5 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Legend: |
|
|
|
|
|
1orthologous gene status in
mouse: |
|
done Expression Atlas |
|
|
|
|
|
|
|
|
|
|
|
|
|
done RT-PCR panel only |
|
|
|
|
|
|
|
|
|
|
|
|
|
no murine probes |
|
|
|
|
|
|
|
|
|
|
|
|
|
no murine orthologue |
|
|
|
|
|
|
|
|
|
2the (+) sign
specifies the identification of the transcript in this tissue by RT-PCR, the
(+/-) sign specifies an extremely low expression of this transcript in this
tissue |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|