HUMAN CHROMOSOME 21 MURINE HOMOLOGUES EXPRESSION
PATTERNS BY RT-PCR |
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tissues2: |
1 |
2 |
3 |
4 |
5 |
6 |
7 |
8 |
9 |
10 |
11 |
12 |
13 |
14 |
15 |
16 |
|
number |
gene name and aliases |
status1 |
forward primer: |
reverse primer: |
brain |
heart |
kidney |
thymus |
liver |
stomach |
muscle |
lung |
testis |
ovary |
skin |
eyes |
E8.5 |
E9.5 |
E12.5 |
E19 |
gene |
control |
b-actin |
|
AGCCATGTACGTAGCCATCC |
TTTGATGTCACGCACGATTT |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
b-actin |
26 |
ADAMTS-1 |
|
CGGAAAAACGTTCAGAGAGG |
GATCACAGCCAGCTTTCACA |
+ |
+ |
+ |
+ |
+ |
|
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
|
ADAMTS-1 |
27 |
ADAMTS5 |
|
GCTACTGCACAGGGAAGAGG |
CCATCCGTAACCTTTGGAGA |
+/- |
|
+ |
|
|
|
|
+ |
+/- |
|
+/- |
+ |
+ |
+ |
|
|
ADAMTS5 |
28 |
N6AMT1/PRED28 |
|
GTGTGGTGTCTGCATTCCTG |
AGGCTGCTTCTATTCCACGA |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
|
N6AMT1/PRED28 |
29 |
KIAA0714 |
|
TTCCACTTGTGCAGCTGTTT |
TCACACATGGGTTTCAGCAT |
+ |
+ |
+ |
+ |
+ |
|
|
+/- |
+ |
|
+ |
+ |
|
+ |
|
|
KIAA0714 |
30 |
C21orf6 |
|
GACCTCTCTGAGGCAGCAGT |
GGGAGGGCAAAGCTTCTATG |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
|
C21orf6 |
31 |
USP16 |
|
TTGAATGCTGCTGTTGATCC |
TCCATTACACTGCCGTCTTG |
+ |
+ |
+ |
+ |
+ |
+ |
+/- |
+ |
+ |
+/- |
+ |
+ |
+ |
+ |
+ |
+ |
USP16 |
32 |
CCT8 |
|
TTTTGGCCAAGCTTATTGCT |
CCTCGGCAGTCTTAATCAGC |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
CCT8 |
33 |
C21orf7 |
|
CCATCTGAAGATGCCATTCC |
AGCCTCAAATTCCTGAACCA |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
|
|
C21orf7 |
34 |
BACH1 |
|
ATCTGAGTGTCCCTGGTTGG |
ACAGGACTCGCTGTCACCTT |
+ |
+ |
+ |
+ |
+/- |
|
|
|
+ |
+ |
+ |
+ |
+ |
+ |
+/- |
|
BACH1 |
35 |
GRIK1 |
|
ACTCCAACAGTGGGCTGAAC |
CCATATTTGCCGTCAGGAAC |
+ |
|
|
|
|
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+/- |
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|
GRIK1 |
36 |
CLDN17 |
|
GGCTGTGGCTCTTGCCTTGG |
AGTTCTCGCTTCTGCCCTGC |
+ |
|
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|
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+ |
|
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+ |
|
|
CLDN17 |
37 |
CLDN8 |
|
TCATGCCTCAGTGGAGAGTG |
TGCATCTGGTGCACTTCATT |
|
|
+ |
|
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|
CLDN8 |
38 |
PRED29 |
|
CTCCAATCCTTGCTCTACGC |
CACAGGACTGCTGGTGTGTC |
|
|
|
|
|
|
|
|
+ |
+ |
|
|
+ |
+ |
+ |
+ |
PRED29 |
39 |
TIAM1 |
|
CTGGTCCCTGACTTGGAAAA |
GGATGGGCTTGATGAGGTAA |
+ |
+/- |
+ |
+ |
|
+ |
|
|
+ |
+ |
+ |
+ |
+/- |
|
|
|
TIAM1 |
40 |
SOD1 |
|
CCAGTGCAGGACCTCATTTT |
TCCCAGCATTTCCAGTCTTT |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
SOD1 |
41 |
SR-A4 |
|
CCTCCACCCCCAGTAAAAAT |
GGTGGCTGTGTAGGAGCTGT |
+ |
+ |
+ |
+ |
+ |
+ |
|
|
+ |
+ |
+ |
+ |
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|
SR-A4 |
42 |
HUNK |
|
CCCACGAAGAAAAGAACAGC |
ATGTCAAAGGAGAGGCTGGA |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
|
|
HUNK |
43 |
C21orf45 |
|
AGGAGGACACCAACTGCATC |
AACTTTCAACGGCTTCAACG |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
C21orf45 |
44 |
C21orf61 |
|
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|
C21orf61 |
45 |
KIAA0539 |
|
TTGAAACCAGAGGAGCACATGTAC |
GAAGAAGGACAGGATGATGTGGAA |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
KIAA0539 |
46 |
C21orf63/PRED34 |
|
AGTGGATCCGGCTGTTGC |
ACACTGGACATGAACAGC |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
C21orf63/PRED34 |
47 |
C21orf59 |
|
TCCACCCTTTCCATGTCATC |
GTGAAGCCCCACTTCTTTGA |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
C21orf59 |
48 |
SYNJ1 |
|
TTGATTGATGAGCTTCTGC |
GCGTCTTCACCGAGCAGGGT |
+ |
|
+ |
+ |
+ |
|
|
+ |
+ |
|
+/- |
+ |
|
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|
|
SYNJ1 |
49 |
C21orf66 |
|
GGTCAGATGGCAGATCACCT |
TAGGGGGTTGAACAGTTTGG |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
C21orf66 |
50 |
C21orf62/PRED36 |
|
CAGCTGCCCAGTAGACATCA |
AGCCCACAGATAGCCAGGTA |
+ |
+ |
+ |
+ |
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+ |
+ |
|
+ |
+ |
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+ |
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C21orf62/PRED36 |
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Legend: |
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1orthologous gene status in
mouse: |
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done Expression Atlas |
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done RT-PCR panel only |
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no murine probes |
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no murine orthologue |
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2the (+) sign
specifies the identification of the transcript in this tissue by RT-PCR, the
(+/-) sign specifies an extremely low expression of this transcript in this
tissue |
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