HUMAN CHROMOSOME 21 MURINE HOMOLOGUES EXPRESSION
PATTERNS BY RT-PCR |
|
|
|
|
tissues2: |
1 |
2 |
3 |
4 |
5 |
6 |
7 |
8 |
9 |
10 |
11 |
12 |
13 |
14 |
15 |
16 |
|
number |
gene name and aliases |
status1 |
forward primer: |
reverse primer: |
brain |
heart |
kidney |
thymus |
liver |
stomach |
muscle |
lung |
testis |
ovary |
skin |
eyes |
E8.5 |
E9.5 |
E12.5 |
E19 |
gene |
control |
b-actin |
|
AGCCATGTACGTAGCCATCC |
TTTGATGTCACGCACGATTT |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
b-actin |
1 |
TPTE/PTEN2 |
|
TTGATATTGGATGCGAACAGCAC |
TGGATACCAGCCCTAGCTGACTG |
|
|
|
|
|
|
|
|
+ |
|
|
|
|
|
|
|
TPTE/PTEN2 |
2 |
C21orf15 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
C21orf15 |
3 |
PRED5 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
PRED5 |
4 |
RBM11 |
|
AAGTCCTTTGGCTTCGTCTG |
GGCACTCGTAATTGGGAAAA |
+ |
|
+ |
+ |
|
|
|
|
+ |
|
+ |
+ |
|
|
|
|
RBM11 |
5 |
PRED6 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
PRED6 |
6 |
STCH |
|
ACAGAAATGGGATGGCTGAG |
GCTGCTGCTGTAGGCTCATT |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
|
STCH |
7 |
SAMSN1 |
|
CGTTTCAAATGCACACAACC |
TCCGAAAACGGTCAAAATTC |
|
|
|
|
|
|
|
|
|
|
+ |
|
|
|
|
|
SAMSN |
8 |
NRIP1/RIP140 |
|
CCAGCACTCTCTGGTCATCA |
TTTGCAGGGTCTCTGCTCTT |
+ |
|
+ |
+ |
|
+/- |
|
+ |
|
|
|
+ |
|
|
|
|
NRIP1/RIP140 |
9 |
USP25 |
|
TAACCAGGCATTGGGAAGAC |
ACTGGAGGCAAACTCCAATG |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
|
|
|
USP25 |
10 |
C21orf34/C21orf35 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
C21orf34/C21orf35 |
11 |
CXADR |
|
AAGTCTGGCGACGCATCTAT |
GTCCGACAGTTTCTGCCATT |
+ |
+ |
+ |
|
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
|
+ |
|
|
CXADR |
12 |
BTG3 |
|
AATTGCGGCTGTTGTCTTCT |
CCCAGGTCGCTGTACAAGAT |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
BTG3 |
13 |
C21orf91/YG-81 |
|
AAGACACGCTCTCCTTCTGC |
ACTCGGACTCCAAATCCAGA |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
C21orf91/YG-81 |
14 |
C21orf68/PRED12 |
|
GACAAAACCCGGAACAGGTA |
CACCTGTCGTCATTCCACTG |
+ |
|
|
|
|
+ |
+ |
|
|
|
|
+ |
+ |
+ |
+ |
+ |
C21orf68/PRED12 |
15 |
PRSS7 |
|
AAGAGGCTCCTTTTGGGAAA |
AAGGAAACGTGGTCACTTGG |
|
|
|
|
|
+ |
|
|
|
|
|
|
|
|
|
|
PRSS7 |
16 |
PRED14 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
PRED14 |
17 |
NCAM2 |
|
GGCATCAGAAACCTGGAAAA |
CCTCCATCATCTTGCTTGGT |
+ |
|
+ |
|
+ |
+ |
|
|
|
|
+ |
|
|
+ |
+ |
|
NCAM2 |
18 |
PRED15 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
PRED15 |
19 |
C21orf42 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
C21orf42 |
20 |
MRPS39 |
|
TAAGGCGTATTGGCGTTCTT |
TCTTGCATCAACGTCCAGAG |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
MRPS39 |
21 |
JAM2 |
|
TACCAACAGGCTCTCCAAGG |
CCTTCTTTATCCTGGCATCG |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
JAM2 |
22 |
ATP5J |
|
TTCGGTCAGCAGTCTCTGTG |
CTGGGGTTTGTCGATGACTT |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
ATP5J |
23 |
GABPA |
|
AGCGCATCTCGTTGAAGAAG |
CCGAAATGTTGAGTGTGGTG |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
|
+/- |
+ |
|
+/- |
+/- |
|
GABPA |
24 |
APP |
|
TTGAAGCCATGCTCAATGAC |
GTTCATGCGCTCGTAGATCA |
+ |
+ |
+ |
+ |
+ |
+ |
|
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
+ |
APP |
25 |
C21orf95 |
|
TTGTTTATGCAGGGGATTGC |
TGATGTGTGCTGCTCTGATG |
+ |
+ |
+ |
|
+ |
|
|
+ |
+ |
|
+ |
+ |
|
+ |
|
|
C21orf95 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Legend: |
|
|
|
|
|
1orthologous
gene status in mouse: |
|
done Expression Atlas |
|
|
|
|
|
|
|
|
|
|
|
|
|
done RT-PCR panel only |
|
|
|
|
|
|
|
|
|
|
|
|
|
no murine probes |
|
|
|
|
|
|
|
|
|
|
|
|
|
no murine orthologue |
|
|
|
|
|
|
|
|
|
2the (+) sign
specifies the identification of the transcript in this tissue by RT-PCR, the
(+/-) sign specifies an extremely low expression of this transcript in this
tissue |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|