HUMAN CHROMOSOME 21 MURINE HOMOLOGUES PROBES
number gene name and aliases Hs accession1 Mm accession1 clone identity/name3 clone origin4 clone accession5 clone mapping6 clone vector7 PCR primers8 antisense9
1 TPTE/PTEN2 NM_013315 AJ311311 mTPTE f1/exR Univ. Geneva RT-PCR MC8 pCRII-TOPO T7/SP6 T7
mTPTE 3' Univ. Geneva RT-PCR MC8 pCRII-TOPO T7/SP6 SP6
2 C21orf15 AY040090                
3 PRED5 AP001660         MC16      
4 RBM11 AP001660 BB633189 UI-M-BH2.1-ape-h-04-0-UI BMAP BE648228 MC16 pT7T3D T7/T3 T3
clone 183 MPI Berlin RT-PCR MC16 pCRII-TOPO T7/SP6 SP6
5 PRED6 AP001660                
6 STCH NM_006948 AK021006 1907602 IMAGE AI226564 MC16 pME18S-FL3 specific specific
7 SAMSN1 NM_022136 NM_023380 3822366 IMAGE BF660993/BF453721 MC16 pT7T3D-Pac T7/T3 T3
8 NRIP1/RIP140 NM_003489 NM_008735 408685 IMAGE AI893344/W85018 MC16 pT7T3D-Pac T7/T3 T3
9 USP25 NM_013396 NM_013918 H3152H01 NIA 15K BG075872 MC16 pSPORT1 T7/SP6 SP6
3708890 IMAGE BE569282 MC16 pCMV-SPORT6 T7/SP6 T7
3597996 IMAGE BE533229 MC16 pCMV-SPORT6 T7/SP6 T7
10 C21orf34/C21orf35 AP001666         MC16      
11 CXADR NM_001338 NM_009988 H3135F11 NIA 15K BG087114/BG074484 MC16 pSPORT1 T7/SP6 SP6
12 BTG3 NM_006806 NM_009770 1515802 IMAGE AW823883/AW823406 MC16 pT7T3D-Pac T7/T3 T3
13 C21orf91/YG-81 NM_017447 AK005829 1495644 IMAGE AI664407 MC16 pT7T3D-Pac T7/T3 T3
4482610 IMAGE BG242627 MC16 pCMV-SPORT6 T7/SP6 T7
H3025B10 NIA 15K BG078224/BG064907 MC16 pSPORT1 T7/SP6 SP6
14 C21orf68/PRED12 AK022689 AK014255 clone nb 6 Univ. Geneva RT-PCR MC16 pCRII-TOPO T7/SP6 SP6
15 PRSS7 NM_002772 NM_008941 clone nb 9 Univ. Geneva RT-PCR MC16 pCRII-TOPO T7/SP6 T7
16 PRED14 AP001679         MC16      
17 NCAM2 NM_004540 NM_010954 UI-M-BH2.2-aop-e-12-0-UI BMAP BE649879/AW121550 MC16 pT7T3D T7/T3 T7
clone 130 MPI Berlin RT-PCR MC16 pCRII-TOPO T7/SP6 SP6
18 PRED15 AL163227                
19 C21orf42 NM_058184                
20 MRPS39 AK000458 AF239728 clone nb 7 Univ. Geneva RT-PCR MC16 pCRII-TOPO T7/SP6 SP6
1514828 IMAGE AW913227/AW823622 MC16 pT7T3D-Pac T7/T3 T3
21 JAM2 NM_021219 NM_023277 1195543 IMAGE AA690843 MC16 pT7T3D-Pac T7/T3 T3
UI-M-BH0-ajq-e-05-0-UI BMAP BE656219/AI853724 MC16 pT7T3D-Pac T7/T3 T3
22 ATP5J NM_001685 NM_016755 H3115C02 NIA 15K BG085594/BG072808 MC16 pSPORT1 T7/SP6 SP6
3512913 IMAGE BG277264 MC16 pT7T3D-Pac T7T3 T3
3657885 IMAGE BG100734 MC16 pBluescript SK+ T7T3 T7
23 GABPA NM_002040 NM_008065 1282513 IMAGE AA866905 MC16 pT7T3D-Pac T7/T3 T3
24 APP NM_000484 NM_007471 H3132G02 NIA 15K BG086954/BG074250 MC16 pSPORT1 T7/SP6 SP6
25 C21orf95/CYYR1 AY061853 AY061854 size 300 bp, clone nb 6 Univ. Geneva RT-PCR MC16 pCRII-TOPO T7/SP6 T7
size 940, clone nb 1 Univ. Geneva RT-PCR MC16 pCRII-TOPO T7/SP6 T7
Legend:
1Homo sapiens (Hs) and Mus musculus (Mm) Genbank accession(s) number(s)
2Rattus norvegicus (Rn) accession number
3in situ riboprobe: cDNA name or EST identity
4in situ riboprobe: EST collection (e.g. IMAGE) or cDNA amplified by RT-PCR (RT-PCR)
5in situ riboprobe: cDNA or EST accession number
6in situ riboprobe: cDNA or EST in silico mapping (e.g. MC16: mouse chromosome 16)
7in situ riboprobe: cDNA or EST vector
8in situ riboprobe: primer to amplify cDNA or EST insert
9in situ riboprobe: used RNA polymerase